Through games of Sunday, April 13, 2025
| # | School (1st votes) | Rec | Pts | Prev. |
| 1 | UW-Whitewater (18) | 21-2 | 612 | 1 |
| 2 | Johns Hopkins (5) | 27-3 | 593 | 3 |
| 3 | Endicott (1) | 21-3 | 554 | 5 |
| 4 | Lynchburg (1) | 27-5 | 552 | 2 |
| 5 | Denison | 21-5 | 526 | 4 |
| 6 | Salisbury | 25-5 | 507 | 7 |
| 7 | Kean | 25-5 | 455 | 11 |
| 8 | La Verne | 23-5 | 430 | 6 |
| 9 | Trinity (Texas) | 26-7 | 419 | 10 |
| 10 | UW-La Crosse | 19-6 | 378 | 8 |
| 11 | Claremont-Mudd-Scripps | 22-8 | 309 | 9 |
| 12 | Brockport | 22-2-1 | 291 | 17 |
| 13 | Cal Lutheran | 22-8 | 283 | 15 |
| 14 | Penn State-Harrisburg | 23-6-1 | 267 | 12 |
| 15 | Salve Regina | 16-7 | 243 | 13 |
| 16 | Coe | 21-5 | 204 | 22 |
| 17 | Centre | 21-7 | 202 | 18 |
| 18 | Rowan | 18-7 | 166 | 20 |
| 19 | Case Western Reserve | 20-10 | 141 | 24 |
| 20 | Gustavus Adolphus | 21-6 | 133 | 14 |
| 21 | Gettysburg | 24-7 | 129 | 16 |
| 22 | Webster | 24-6 | 125 | rv |
| 23 | Washington and Jefferson | 20-5 | 90 | rv |
| 24 | Concordia (Texas) | 25-9 | 85 | 19 |
| 25 | Chicago | 21-9 | 63 | 21 |
Dropped out: No. 23. Bowdoin; No. 25. East Texas Baptist.
Others receiving votes: Pomona-Pitzer 60; East Texas Baptist 56; UW-Oshkosh 45; Bowdoin 35; Bethel (Minn.) 27; Ramapo 24; Millsaps 21; Buena Vista 17; Mount Union 17; Eastern Connecticut State 16; Babson 13; Maryville (Tenn.) 9; Keystone 6; Montclair State 6; Carthage 5; Ohio Northern 5; Rhodes 3; Misericordia 2; Emory 1.
The D3baseball.com Top 25 is voted on by a panel of 25 Sports Information Directors and media members from across the country, and is published weekly. Full members of NCAA Division III are eligible.