Through the end of the 2025 season.
| # | School (1st votes) | Rec | Pts | Prev. |
| 1 | UW-Whitewater (25) | 49-6 | 625 | 3 |
| 2 | Endicott | 45-6 | 574 | 4 |
| 3 | Messiah | 39-16 | 561 | - |
| 4 | Denison | 41-7 | 546 | 2 |
| 5 | Rowan | 38-12 | 522 | 15 |
| 6 | Johns Hopkins | 44-5 | 499 | 1 |
| 7 | Kean | 41-11 | 491 | 9 |
| 8 | Trinity (Texas) | 41-10 | 461 | 6 |
| 9 | Salve Regina | 36-9 | 410 | 7 |
| 10 | Lynchburg | 41-9 | 402 | 5 |
| 11 | Salisbury | 34-10 | 362 | 8 |
| 12 | Claremont-Mudd-Scripps | 35-15 | 307 | 21 |
| 13 | Case Western Reserve | 30-14-1 | 294 | 17 |
| 14 | UW-La Crosse | 35-11 | 252 | 12 |
| 15 | UW-Oshkosh | 35-16 | 233 | 25 |
| 16 | McMurry | 35-13 | 194 | rv |
| 17 | La Verne | 35-11 | 185 | 10 |
| 18 | Centre | 32-11 | 148 | 16 |
| 19 | Belhaven | 34-15 | 141 | rv |
| 20 | Cortland | 31-13 | 137 | 19 |
| 21 | Brockport | 36-5-2 | 123 | 11 |
| 22 | Webster | 37-9 | 117 | 13 |
| 23 | Keystone | 37-11 | 110 | 18 |
| 24 | Pomona-Pitzer | 32-17 | 90 | 23 |
| 25 | Gustavus Adolphus | 37-9 | 81 | 14 |
Dropped out: No. 20 Buena Vista; No. 22 Penn State-Harrisburg; No. 25 Concordia (Texas).
Others receiving votes: Concordia (Texas) 63; East Texas Baptist 42;Chicago 27; Buena Vista 23; Emory 23; Baldwin Wallace 16; Penn State-Harrisburg 15; Adrian 11; Methodist 9; MSOE 7; Rutgers-Camden 6; Randolph-Macon 5; Mount Union 4, TCNJ 4, Maryville (Tenn.) 3; Millsaps 1; Washington & Jefferson 1.
The D3baseball.com Top 25 is voted on by a panel of 25 Sports Information Directors and media members from across the country, and is published weekly. Full members of NCAA Division III are eligible.