Through games of Sunday, March 9, 2025
| # | School (1st votes) | Rec | Pts | Prev. |
| 1 | UW-Whitewater (19) | 3-0 | 616 | 1 |
| 2 | Salve Regina (4) | 7-0 | 596 | 2 |
| 3 | Johns Hopkins (2) | 9-0 | 580 | 3 |
| 4 | Lynchburg | 12-1 | 549 | 5 |
| 5 | Endicott | 4-1 | 499 | 6 |
| 6 | Denison | 7-2 | 483 | 4 |
| 7 | Trinity (Texas) | 12-1 | 480 | 17 |
| 8 | La Verne | 12-1 | 449 | 10 |
| 9 | Salisbury | 7-2 | 435 | 7 |
| 10 | Pomona-Pitzer | 10-4 | 327 | 14 |
| 11 | Kean | 12-1 | 325 | 18 |
| 12 | UW-La Crosse | 2-2 | 292 | 9 |
| 13 | Penn State-Harrisburg | 9-1 | 284 | 19 |
| 14 | Centre | 11-1 | 261 | 25 |
| 15 | Misericordia | 8-4 | 257 | 11 |
| 16 | Claremont-Mudd-Scripps | 10-3 | 225 | 20 |
| 17 | Rowan | 4-1 | 186 | 21 |
| 18 | Christopher Newport | 9-6 | 150 | 12 |
| 19 | Babson | 3-0 | 140 | 24 |
| 20 | Rhodes | 12-5 | 127 | 13 |
| 21 | Baldwin Wallace | 4-3 | 113 | 16 |
| 22 | East Texas Baptist | 9-7 | 97 | 22 |
| 23 | Cal Lutheran | 10-2 | 91 | rv |
| 24 | Cortland | 5-5 | 79 | 15 |
| 25 | Emory | 12-4 | 60 | rv |
Dropped out: No. 17 Randolph Macon; No. 23 Case Western Reserve
Others receiving votes: Washington (Mo.) 45; Case Western Reserve 37; Rutgers-Camden 37; Randolph-Macon 31; Gettysburg 26; Piedmont 23; Coe 22; Chicago 19; Elizabethtown 19; Gustavus Adolphus 19; Keystone 19; Marietta 14; Muskingum 13; Redlands 13; Methodist 12; Shenandoah 11; Kalamazoo 10; McMurry 10; Mt. St. Joseph 10; Mass-Boston 9; Texas-Dallas 7; Brockport 6; Huntingdon 5; Eastern Connecticut State 2; Grove City 2; UW-Oshkosh 2; Colby 1.
The D3baseball.com Top 25 is voted on by a panel of 25 Sports Information Directors and media members from across the country, and is published weekly. Full members of NCAA Division III are eligible.