Through games of Sunday April 9, 2017
| # | School (1st votes) | Rec | Pts | Prev. |
| 1 | Shenandoah (15) | 24-2 | 606 | 1 |
| 2 | Birmingham-Southern (4) | 27-5 | 593 | 3 |
| 3 | UW-Whitewater (4) | 16-2 | 571 | 4 |
| 4 | LaGrange (2) | 31-4 | 560 | 2 |
| 5 | Texas-Tyler | 28-5 | 509 | 5 |
| 6 | Cortland | 22-5 | 504 | 6 |
| 7 | Tufts | 15-2 | 449 | 8 |
| 8 | Wooster | 16-4 | 431 | 7 |
| 9 | Centenary (La.) | 26-6 | 351 | 10 |
| 10 | Johns Hopkins | 19-6 | 344 | 13 |
| 11 | Alvernia | 20-4-1 | 319 | 11 |
| 12 | Cal Lutheran | 21-6 | 306 | 19 |
| 13 | Randolph-Macon | 20-7 | 297 | 16 |
| 14 | Oswego State | 14-6 | 280 | 9 |
| 15 | Texas-Dallas | 22-7 | 257 | 12 |
| 16 | Washington U. | 16-5 | 241 | 18 |
| 17 | Washington and Jefferson | 15-3 | 185 | 21 |
| 18 | Salisbury | 23-7 | 178 | 22 |
| 19 | TCNJ | 14-6 | 175 | 17 |
| 20 | Denison | 18-3 | 124 | rv |
| 21 | St. Joseph's (Maine) | 17-2 | 111 | rv |
| 22 | La Roche | 19-6 | 105 | rv |
| 23 | Otterbein | 18-6 | 101 | 20 |
| 24 | Augustana | 18-6 | 96 | 14 |
| 25 | St. John Fisher | 15-6 | 70 | rv |
Dropped out: No. 15 UW-La Crosse, No. 23 Christopher Newport, No. 24 Emory, and No. 25 Bethel.
Others receiving votes: Salve Regina 58, Emory 55, Bethel (Minn.) 31, UW-La Crosse 28, Adrian 27, Mount Union 27, Catholic 25, Occidental 20, Linfield 12, Webster 12, Pacific Lutheran 10, Concordia-Chicago 9, Kean 8, St. Scholastica 8, Keystone 7, Rowan 7, Washington and Lee 7, Widener 6, DePauw 3, Marietta 1, Willamette 1.
The D3baseball.com Top 25 is voted on by a panel of 25 Sports Information Directors and media members from across the country, and is published weekly. Full members of NCAA Division III are eligible.