Through games of Sunday April 16, 2017
| # | School (1st votes) | Rec | Pts | Prev. |
| 1 | Shenandoah (12) | 27-3 | 597 | 1 |
| 2 | LaGrange (10) | 35-4 | 591 | 4 |
| 3 | UW-Whitewater (3) | 20-3 | 570 | 3 |
| 4 | Birmingham-Southern | 29-6 | 567 | 2 |
| 5 | Cortland | 28-5 | 526 | 6 |
| 6 | Texas-Tyler | 28-5 | 509 | 5 |
| 7 | Wooster | 19-5 | 436 | 8 |
| 8 | Tufts | 18-3-1 | 417 | 7 |
| 9 | Johns Hopkins | 24-6 | 415 | 10 |
| 10 | Centenary (La.) | 29-6 | 386 | 9 |
| 11 | Randolph-Macon | 23-8 | 306 | 13 |
| 12 | Alvernia | 23-5-2 | 302 | 11 |
| 13 | TCNJ | 20-6 | 292 | 19 |
| 14 | Oswego State | 19-7 | 284 | 14 |
| 15 | Texas-Dallas | 25-8 | 269 | 15 |
| 16 | Salisbury | 26-8 | 263 | 18 |
| 17 | La Roche | 21-6 | 220 | 22 |
| 18 | St. John Fisher | 18-6 | 168 | 25 |
| 19 | Washington and Jefferson | 18-5 | 128 | 17 |
| 20 | Washington U. | 18-8 | 125 | 16 |
| 21 | Salve Regina | 20-4 | 119 | rv |
| 22 | Cal Lutheran | 22-9 | 104 | 12 |
| 23 | Mount Union | 22-5 | 79 | rv |
| 24 | St. Joseph's (Maine) | 20-4 | 78 | 21 |
| 25 | Emory | 24-11 | 59 | rv |
Dropped out: No. 20 Denison, No. 23 Otterbein, No. 24 Augustana.
Others receiving votes: Bethel (Minn.) 45, DePauw 42, Otterbein 38, Augustana (Ill.) 34, Denison 29, Pacific Lutheran 23, St. Scholastica 18, Southern Maine 18, Keystone 12, Webster 10, Adrian 8, Thomas More 8, Rowan 7, Misericordia 6, Concordia-Chicago 4, Occidental 4, Wheaton (Mass.) 4, Willamette 3, Arcadia 1, Marietta 1.
The D3baseball.com Top 25 is voted on by a panel of 25 Sports Information Directors and media members from across the country, and is published weekly. Full members of NCAA Division III are eligible.