Through games of Sunday April 17, 2016
| # | School (1st votes) | Rec | Pts | Prev. |
| 1 | Cortland (22) | 27-5 | 620 | 3 |
| 2 | Randolph-Macon (1) | 26-5-1 | 532 | 6 |
| 3 | UW-Whitewater | 17-4 | 524 | 2 |
| 4 | Oswego State | 23-3 | 509 | 8 |
| 5 | Ramapo | 23-4-1 | 496 | 1 |
| 6 | Trinity (Texas) (1) | 29-7 | 485 | 4 |
| 7 | Birmingham-Southern | 29-9 | 451 | 9 |
| 8 | Emory | 27-9 | 423 | 5 |
| 9 | UW-La Crosse | 18-5 | 412 | 12 |
| 10 | St. Thomas (1) | 17-3 | 381 | 15 |
| 11 | Shenandoah | 26-8 | 332 | 7 |
| 12 | Frostburg State | 23-8 | 321 | 13 |
| 13 | Occidental | 26-5 | 281 | 17 |
| 14 | Whitworth | 25-8 | 278 | 10 |
| 15 | TCNJ | 23-4 | 250 | 22 |
| 16 | Southern Maine | 18-6 | 247 | 18 |
| 17 | Salisbury | 20-10 | 223 | 11 |
| 18 | Centenary (La.) | 24-9 | 138 | 14 |
| 19 | Concordia-Chicago | 22-7 | 136 | rv |
| 20 | Christopher Newport | 25-12 | 116 | 16 |
| 21 | North Central (Ill.) | 19-5 | 110 | 23 |
| 22 | La Roche | 25-7 | 94 | rv |
| 23 | Cal Lutheran | 23-9 | 90 | 25 |
| 24 | Texas Lutheran | 23-11 | 84 | 24 |
| 25 | Amherst | 16-6 | 76 | 19 |
Dropped out: No. 20 Texas-Tyler, No. 21 McDaniel.
Others receiving votes: Wartburg 56, Wheaton (Mass.) 40, Concordia Texas 37, LaGrange 36, Texas-Tyler 35, St. John Fisher 28, Misericordia 26, Grinnell 22, Maryville (Tenn.) 21, Marymount 20, McDaniel 20, Buena Vista 19, Denison 17, Keystone 17, Berry 16, Suffolk 16, Tufts 12, Ferrum 11, Chapman 10, Rutgers-Camden 9, Western New England 9, Marietta 8, Hardin-Simmons 6, East Texas Baptist 5, Rose-Hulman 4, Thomas More 4, Wooster 4, Wesleyan (Conn.) 3, Pacific (Ore.) 2, Adrian 1, Johns Hopkins 1, Otterbein 1.
The D3baseball.com/NCBWA Top 25 is voted on by a panel of 25 Sports Information Directors and media members from across the country, and is published weekly. Full members of NCAA Division III are eligible.