Through games of Sunday March 6, 2016
| # | School (1st votes) | Rec | Pts | Prev. |
| 1 | Cortland (25) | 8-0 | 625 | 1 |
| 2 | UW-La Crosse | 0-0 | 577 | 2 |
| 3 | Emory | 11-2 | 560 | 3 |
| 4 | Trinity (Texas) | 12-3 | 534 | 4 |
| 5 | Birmingham-Southern | 11-2 | 502 | 5 |
| 6 | Shenandoah | 9-1 | 459 | 9 |
| 7 | UW-Whitewater | 0-0 | 411 | 8 |
| 8 | Frostburg State | 6-2 | 407 | 6 |
| 9 | Randolph-Macon | 11-1 | 370 | 16 |
| 10 | Southern Maine | 0-0 | 354 | 12 |
| 11 | UW-Stevens Point | 0-0 | 326 | 10 |
| 12 | Mary Washington | 13-1 | 300 | 18 |
| 13 | Salisbury | 4-3 | 291 | 7 |
| 14 | Whitworth | 12-2 | 290 | 14 |
| 15 | Ramapo | 2-0 | 273 | 15 |
| 16 | Texas-Tyler | 11-4 | 239 | 17 |
| 17 | Christopher Newport | 10-1 | 234 | 24 |
| 18 | Marietta | 4-2 | 184 | 19 |
| 19 | Webster | 5-3 | 183 | 13 |
| 20 | Wooster | 0-0 | 113 | 23 |
| 21 | Concordia-Chicago | 4-0 | 105 | rv |
| 22 | Berry | 13-4 | 92 | 21 |
| 23 | Oswego State | 7-0 | 83 | rv |
| 24 | Wartburg | 5-3 | 81 | 22 |
| 25 | Linfield | 11-6 | 77 | 20 |
Dropped out: No. 11. Kean, No. 25. Heidelberg.
Others receiving votes: St. Thomas (Minn.) 67, Kean 45, Misericordia 44, Carthage 31, Centenary (La.) 30, Rhodes 23, Heidelberg 21, Rutgers-Camden 20, Maryville (Tenn.) 20, Cal Lutheran 16, Brockport 15, Buena Vista 13, Pacific Lutheran 10, MIT 10, Mt. St. Joseph 10, Keystone 9, La Roche 9, Ohio Northern 8, Adrian 7, Swarthmore 6, Endicott 6, St. Scholastica 5, Washington (Mo.) 5, Coe 5, Chicago 4, Thomas More 4, Worcester St. 4, Moravian 3, Baldwin Wallace 2, George Fox 1, McDaniel 1, Tufts 1.
The D3baseball.com Top 25 is voted on by a panel of 25 Sports Information Directors and media members from across the country, and is published weekly. Full members of NCAA Division III are eligible.